PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2DL_F600B5FDF.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 120aa    MW: 13169.3 Da    PI: 10.324
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2DL_F600B5FDF.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.26.3e-323087359
                           -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY  3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                           D+y+WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+ +dp ++++tYegeH+h+
  Traes_2DL_F600B5FDF.1 30 DEYSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERALDDPAMLVVTYEGEHRHS 87
                           9************************9888****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105332.0E-13126IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.805.9E-331687IPR003657WRKY domain
PROSITE profilePS5081130.1252389IPR003657WRKY domain
SuperFamilySSF1182904.32E-272687IPR003657WRKY domain
SMARTSM007744.6E-372888IPR003657WRKY domain
PfamPF031064.9E-273086IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    Send to blast
CHCSKRRKNR VKTTVRVPAV SAKIADIPPD EYSWRKYGQK PIKGSPYPRG YYKCSTVRGC  60
PARKHVERAL DDPAMLVVTY EGEHRHSPGP MPMQMAPSPM PMPMGAPVAV ASVSAGNGHV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A6e-231687272WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKR8274040.0KR827404.1 Triticum aestivum WRKY53 transcriptional factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003580447.15e-65PREDICTED: probable WRKY transcription factor 11
SwissprotQ9SV152e-57WRK11_ARATH; Probable WRKY transcription factor 11
TrEMBLW5C2921e-83W5C292_WHEAT; Uncharacterized protein
TrEMBLM8C5B52e-83M8C5B5_AEGTA; Putative WRKY transcription factor 11
TrEMBLW5BAX92e-83W5BAX9_WHEAT; Uncharacterized protein
TrEMBLA0A0M4CUQ02e-83A0A0M4CUQ0_WHEAT; WRKY53 transcriptional factor
STRINGMLOC_22106.21e-64(Hordeum vulgare)
STRINGBRADI5G20700.12e-64(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP61738171
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.19e-48WRKY DNA-binding protein 11
Publications ? help Back to Top
  1. Wang X, et al.
    Expression of TaWRKY44, a wheat WRKY gene, in transgenic tobacco confers multiple abiotic stress tolerances.
    Front Plant Sci, 2015. 6: p. 615
    [PMID:26322057]